Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PAE0666 | PAE3559 | PAE0666 | PAE3559 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | HIT family protein; Unclassified. | 0.461 |
| PAE0666 | PAE3562 | PAE0666 | PAE3562 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.999 |
| PAE0666 | rpoA2 | PAE0666 | PAE0667 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit A'' (rpoA2); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| PAE0666 | rpoP | PAE0666 | PAE2258 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.991 |
| PAE0666 | spt4 | PAE0666 | PAE3563 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit E'' (rpoE2); Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.685 |
| PAE0666 | spt5 | PAE0666 | PAE3103 | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription antitermination protein nusG, putative; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. | 0.881 |
| PAE3559 | PAE0666 | PAE3559 | PAE0666 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.461 |
| PAE3559 | PAE3560 | PAE3559 | PAE3560 | HIT family protein; Unclassified. | Hypothetical protein. | 0.825 |
| PAE3559 | PAE3561 | PAE3559 | PAE3561 | HIT family protein; Unclassified. | Conserved hypothetical protein. | 0.791 |
| PAE3559 | PAE3562 | PAE3559 | PAE3562 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.560 |
| PAE3559 | rpoA2 | PAE3559 | PAE0667 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit A'' (rpoA2); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.461 |
| PAE3559 | spt4 | PAE3559 | PAE3563 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit E'' (rpoE2); Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.558 |
| PAE3560 | PAE3559 | PAE3560 | PAE3559 | Hypothetical protein. | HIT family protein; Unclassified. | 0.825 |
| PAE3560 | PAE3561 | PAE3560 | PAE3561 | Hypothetical protein. | Conserved hypothetical protein. | 0.794 |
| PAE3560 | PAE3562 | PAE3560 | PAE3562 | Hypothetical protein. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.569 |
| PAE3560 | spt4 | PAE3560 | PAE3563 | Hypothetical protein. | DNA-directed RNA polymerase subunit E'' (rpoE2); Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.569 |
| PAE3561 | PAE3559 | PAE3561 | PAE3559 | Conserved hypothetical protein. | HIT family protein; Unclassified. | 0.791 |
| PAE3561 | PAE3560 | PAE3561 | PAE3560 | Conserved hypothetical protein. | Hypothetical protein. | 0.794 |
| PAE3561 | PAE3562 | PAE3561 | PAE3562 | Conserved hypothetical protein. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.760 |
| PAE3561 | rps6e | PAE3561 | PAE1505 | Conserved hypothetical protein. | Protein synthesis; Ribosomal proteins: synthesis and modification; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.701 |
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