STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3580Conserved hypothetical protein. (379 aa)    
Predicted Functional Partners:
PAE3581
Conserved hypothetical protein; Belongs to the UPF0210 family.
       0.705
PAE3582
Conserved hypothetical protein; Belongs to the UPF0237 family.
       0.705
PAE0055
Hypothetical protein.
 
     0.545
PAE3169
Conserved protein with 7 CBS domains; Unclassified.
  
     0.511
PAE3584
Citrate synthase part 1, authentic frameshift; Energy metabolism; TCA cycle.
       0.495
PAE3585
Citrate synthase part 2, authentic frameshift; Energy metabolism; TCA cycle.
       0.495
PAE3657
Transport and binding proteins; Unknown substrate.
  
     0.492
fau-1
Conserved hypothetical protein; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences.
 
     0.461
PAE3175
Conserved hypothetical protein.
  
     0.454
PAE2138
Conserved hypothetical protein.
  
     0.453
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.