STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3603Nitric oxide reductase, cytochrome b subunit; Energy metabolism; Electron transport. (721 aa)    
Predicted Functional Partners:
PAE1362
nosD homolog; Energy metabolism; Electron transport.
 
  
 0.617
PAE0579
Biosynthesis of cofactors, prosthetic groups, and carriers; Other.
 
  
 0.590
PAE0596
Biosynthesis of cofactors, prosthetic groups, and carriers; Other.
 
  
 0.568
PAE3604
Hypothetical; Conserved within genome.
       0.558
PAE3611
Nitrate reductase alpha subunit (narG); Energy metabolism; Electron transport.
 
   
 0.552
PAE1888
Multicopper oxidase; Unclassified.
     
 0.545
PAE2147
Conserved hypothetical protein part 1, authentic frameshift.
 
  
 0.525
PAE1252
Conserved hypothetical protein.
 
  
 0.521
PAE0289
Metallo cofactor biosynthesis protein, conjectural; Biosynthesis of cofactors, prosthetic groups, and carriers; Other.
 
  
 0.507
PAE0581
Heme biosynthesis protein; Biosynthesis of cofactors, prosthetic groups, and carriers; Heme, porphyrin and cobalamin.
  
  
 0.501
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.