STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3636Conserved protein (gufA); Unclassified. (246 aa)    
Predicted Functional Partners:
PAE3638
Conserved hypothetical protein.
       0.559
PAE3640
Hypothetical protein.
       0.559
sod
Superoxide dismutase (sod); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.540
PAE2715
Transport and binding proteins; Cations.
 
 
 0.518
PAE1538
Hypothetical protein.
  
    0.512
PAE2751
Cytochrome C-type biogenesis protein (ccdA), conjectural; Energy metabolism; Electron transport.
  
    0.512
PAE3641
Conserved hypothetical protein.
       0.493
PAE0731
Transcriptional regulatory protein, conjectural; Regulatory functions; General.
  
  
 0.472
PAE2743
Fumarate hydratase class II; Energy metabolism; TCA cycle.
  
    0.418
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.