STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3680Conserved hypothetical protein; Belongs to the UPF0282 family. (303 aa)    
Predicted Functional Partners:
PAE3682
Hypothetical protein.
       0.773
PAE3679
Protease IV, conjectural; Protein fate; Degradation of proteins, peptides, and glycopeptides.
       0.686
PAE3683
Hypothetical protein.
       0.598
nep1
Conserved hypothetical protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
 
     0.551
PAE3079
Conserved hypothetical protein.
 
     0.530
PAE0628
Conserved hypothetical protein.
  
   
 0.528
PAE3641
Conserved hypothetical protein.
  
     0.463
PAE1632
Conserved hypothetical protein; Belongs to the UPF0201 family.
  
   
 0.449
PAE0705
Conserved hypothetical protein.
  
     0.447
PAE1372
Conserved hypothetical protein.
 
     0.446
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.