STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS47643.1Class E sortase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
AOS47642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
 
     0.667
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
     0.544
AOS48027.1
Class C sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
AOS47458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
AOS47083.1
Class C sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AOS47370.1
Type 2 fimbrial subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.452
AOS47156.1
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Actinomyces hongkongensis
NCBI taxonomy Id: 178339
Other names: A. hongkongensis, Actinomyces hongkongensis Woo et al. 2004, CCUG 48484, CIP 107949, DSM 15629, LMG 21939, LMG:21939, strain HKU8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.