STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001647275_00544Unannotated protein. (389 aa)    
Predicted Functional Partners:
GCA_001647275_00543
Unannotated protein.
 0.999
GCA_001647275_04324
Unannotated protein.
 0.985
GCA_001647275_02705
Unannotated protein.
 
 0.979
GCA_001647275_04514
Unannotated protein.
 0.972
GCA_001647275_01641
Unannotated protein.
  
 0.774
GCA_001647275_00545
Unannotated protein.
     0.703
GCA_001647275_04511
Unannotated protein.
 
  
 0.580
GCA_001647275_03786
Unannotated protein.
 
  
  0.567
GCA_001647275_04401
Unannotated protein.
 
  
 0.542
GCA_001647275_00475
Unannotated protein.
 
   
 0.520
Your Current Organism:
Rufibacter ruber
NCBI taxonomy Id: 1783499
Other names: CCM 8646, LMG 29438, LMG:29438, R. ruber, Rufibacter ruber Kyrova et al. 2016, Rufibacter sp. CCM 8646
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.