STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001647275_02426Unannotated protein. (716 aa)    
Predicted Functional Partners:
GCA_001647275_00831
Unannotated protein.
  
 0.997
GCA_001647275_01507
Unannotated protein.
   
 
 0.930
GCA_001647275_00462
Unannotated protein.
   
 0.929
GCA_001647275_00440
Unannotated protein.
   
  0.915
GCA_001647275_00434
Unannotated protein.
  
 0.912
GCA_001647275_00427
Unannotated protein.
   
 
 0.901
GCA_001647275_04366
Unannotated protein.
   
 0.900
GCA_001647275_00515
Unannotated protein.
 
  
 0.895
GCA_001647275_01583
Unannotated protein.
   
 
 0.889
GCA_001647275_00430
Unannotated protein.
  
  
 0.884
Your Current Organism:
Rufibacter ruber
NCBI taxonomy Id: 1783499
Other names: CCM 8646, LMG 29438, LMG:29438, R. ruber, Rufibacter ruber Kyrova et al. 2016, Rufibacter sp. CCM 8646
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.