STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW15367.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)    
Predicted Functional Partners:
AMW11081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.934
AMW11079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.896
AMW11080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.870
AMW11082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.870
AMW11083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.740
AMW08290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.559
AMW10299.1
Methyltransferase FkbM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
AMW15349.1
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
AMW13019.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
AMW13450.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
Your Current Organism:
Streptomyces qaidamensis
NCBI taxonomy Id: 1783515
Other names: CGMCC 4.7315, JCM 31184, S. qaidamensis, Streptomyces sp. S10(2016), strain S10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.