STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1020Inorganic phosphate transporter, PiT family; Scaffold_4_72. (423 aa)    
Predicted Functional Partners:
AWU55_1021
Hypothetical protein; Scaffold_4_73.
 
  
 0.990
AWU55_797
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Scaffold_3_6; Belongs to the precorrin methyltransferase family.
  
  
 0.810
AWU55_1022
Hypothetical protein; Scaffold_4_74.
       0.583
argA
Amino-acid N-acetyltransferase; Scaffold_4_71; Belongs to the acetyltransferase family. ArgA subfamily.
     
 0.552
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
    0.547
lysS
lysyl-tRNA synthetase, class II; Scaffold_0_119; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
    0.526
AWU55_1023
Ion transporter; Scaffold_4_75.
  
    0.518
AWU55_1067
Glutamate synthase (NADPH/NADH) large chain; Scaffold_4_119.
  
  
 0.488
AWU55_1680
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; Scaffold_11_54.
     
 0.457
AWU55_1683
Phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
     
 0.457
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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