STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1033NTE family protein; Scaffold_4_85. (384 aa)    
Predicted Functional Partners:
AWU55_1032
3-hydroxybutyrate dehydrogenase; Scaffold_4_84.
 
  
  0.838
AWU55_1028
Polyhydroxyalkanoate synthase; Scaffold_4_80.
 
     0.652
AWU55_2746
Polyhydroxyalkanoate synthase; Scaffold_66_10.
 
     0.625
AWU55_1034
Putative membrane fusion protein; Scaffold_4_86.
 
     0.577
AWU55_1029
PHB de-polymerase domain-containing protein; Scaffold_4_81.
  
     0.569
AWU55_1887
Hypothetical protein; Scaffold_18_23.
 
     0.526
AWU55_2973
Poly(3-hydroxyalkanoate) synthetase; Scaffold_135_10.
 
     0.524
AWU55_2291
Poly(3-hydroxyalkanoate) synthetase; Scaffold_30_3.
 
     0.522
AWU55_1035
Antibiotic transport system ATP-binding protein; Scaffold_4_87.
       0.489
AWU55_1036
Hypothetical protein; Scaffold_4_88.
       0.489
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.