STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1292UDP-glucose 6-dehydrogenase; Scaffold_6_84. (453 aa)    
Predicted Functional Partners:
AWU55_3032
dTDP-glucose 4,6-dehydratase; Scaffold_208_12; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.887
AWU55_3031
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.883
AWU55_3128
Mannose-1-phosphate guanylyltransferase; Scaffold_520_5; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.879
AWU55_691
UTP--glucose-1-phosphate uridylyltransferase; Scaffold_2_103.
  
 0.856
AWU55_2830
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase; Scaffold_74_4.
    
 0.853
AWU55_3030
Hypothetical protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.852
AWU55_2638
UDP-glucuronate 4-epimerase; Scaffold_46_23.
  0.824
AWU55_1291
Alginate biosynthesis protein Alg8; Scaffold_6_83.
  
 
 0.810
AWU55_1290
Hypothetical protein; Scaffold_6_82.
  
 
 0.669
AWU55_1144
XRE family transcriptional regulator; Scaffold_5_65.
  
 
 0.652
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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