STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1358PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; Scaffold_7_59. (962 aa)    
Predicted Functional Partners:
AWU55_1732
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; Scaffold_12_3.
 
0.975
AWU55_300
PAS/PAC and GAF sensor-containing diguanylate cyclase; Scaffold_0_300.
 
0.972
AWU55_832
Diguanylate cyclase; Scaffold_3_41.
 
0.969
AWU55_833
Diguanylate cyclase; Scaffold_3_42.
 
 0.968
AWU55_1539
Multi-sensor hybrid histidine kinase; Scaffold_9_60.
 
 0.965
AWU55_404
Two-component system, NarL family, sensor histidine kinase BarA; Scaffold_1_35.
 
 0.964
AWU55_195
Multi-sensor hybrid histidine kinase; Scaffold_0_195.
 
 0.962
AWU55_2708
Signal transduction histidine kinase; Scaffold_55_8.
 
 0.961
AWU55_1355
Hpt sensor hybrid histidine kinase; Scaffold_7_56.
 
 0.960
AWU55_1237
PAS/PAC sensor-containing diguanylate cyclase; Scaffold_6_29.
 
0.957
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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