STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1548Hypothetical protein; Scaffold_9_69. (376 aa)    
Predicted Functional Partners:
AWU55_1549
Hypothetical protein; Scaffold_9_70.
     0.961
AWU55_1547
Hypothetical protein; Scaffold_9_68.
 
 
  0.947
AWU55_2019
Scaffold_22_4.
 
  
  0.779
AWU55_1900
Tripartite Tricarboxylate transporter (TTT) family, small transmembrane protein; Scaffold_18_36.
 
 
 0.666
AWU55_2665
Putative tricarboxylic transport membrane protein; Scaffold_47_6.
 
 
 0.665
AWU55_1843
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase; Scaffold_15_43.
  
 
  0.613
AWU55_1550
LysR family transcriptional regulator; Scaffold_9_71; Belongs to the LysR transcriptional regulatory family.
 
     0.609
AWU55_984
Hypothetical protein; Scaffold_4_36.
  
 
 0.572
AWU55_2223
malonyl-CoA decarboxylase; Scaffold_28_43.
  
 
  0.536
AWU55_1899
Putative tricarboxylic transport membrane protein; Scaffold_18_35.
   
 
  0.529
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.