STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1549Hypothetical protein; Scaffold_9_70. (387 aa)    
Predicted Functional Partners:
AWU55_1548
Hypothetical protein; Scaffold_9_69.
     0.961
AWU55_556
2-methylcitrate dehydratase; Scaffold_1_187.
  
 
  0.947
AWU55_2693
Aconitate hydratase; Scaffold_47_34.
  
 
 0.945
AWU55_91
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.945
AWU55_2019
Scaffold_22_4.
 
  
 0.938
AWU55_1130
Adenylyltransferase; Scaffold_5_51.
     
 0.887
AWU55_892
Aconitate hydratase 2 / 2-methylisocitrate dehydratase; Scaffold_3_101; Belongs to the aconitase/IPM isomerase family.
    
 0.885
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.810
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.799
AWU55_1851
Ferredoxin; Scaffold_15_51.
  
  
  0.774
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.