STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1592Formate dehydrogenase subunit delta; Scaffold_9_113. (78 aa)    
Predicted Functional Partners:
AWU55_1589
Formate dehydrogenase subunit gamma; Scaffold_9_110.
   
 0.993
AWU55_1591
Formate dehydrogenase subunit alpha; Scaffold_9_112.
  
 0.986
AWU55_2258
Formate dehydrogenase, alpha subunit; Scaffold_29_28.
  
 0.967
AWU55_1980
Formate dehydrogenase, alpha subunit; Scaffold_19_60; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.959
AWU55_1590
NADH dehydrogenase (Quinone); Scaffold_9_111.
   
 0.955
AWU55_2389
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.897
AWU55_2474
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.871
AWU55_1566
Glutathione-independent formaldehyde dehydrogenase; Scaffold_9_87.
     
 0.867
AWU55_2390
NADH-quinone oxidoreductase subunit E; Scaffold_33_38.
   
 0.845
mqo
Malate dehydrogenase (quinone); Scaffold_6_17.
     
 0.727
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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