STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1757Hypothetical protein; Scaffold_12_28. (165 aa)    
Predicted Functional Partners:
AWU55_1756
TRAP dicarboxylate transporter-DctP subunit; Scaffold_12_27.
 
 
  0.928
AWU55_1758
Trap dicarboxylate transporter, dctm subunit; Scaffold_12_29.
 
  0.918
AWU55_1755
Cytochrome p450 monooxygenase; Scaffold_12_26; Belongs to the cytochrome P450 family.
 
     0.696
AWU55_1842
TRAP dicarboxylate transporter subunit DctP; Scaffold_15_42.
  
 
  0.621
AWU55_12
TRAP dicarboxylate transporter subunit DctP; Scaffold_0_12.
  
 
  0.617
AWU55_1383
TRAP transporter substrate-binding protein; Scaffold_7_84.
  
 
  0.576
AWU55_2223
malonyl-CoA decarboxylase; Scaffold_28_43.
 
  0.552
AWU55_1754
Hypothetical protein; Scaffold_12_25.
 
     0.539
AWU55_14
TRAP dicarboxylate transporter subunit DctM; Scaffold_0_14.
  
  0.535
AWU55_1840
TRAP transporter large transmembrane protein; Scaffold_15_40.
  
  0.515
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.