STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1760Type I restriction enzyme, R subunit; Scaffold_12_31. (1121 aa)    
Predicted Functional Partners:
AWU55_1765
Restriction modification system DNA specificity domain protein; Scaffold_12_36.
 
 
 0.994
AWU55_1766
Type I restriction enzyme M protein; Scaffold_12_37.
 
 
 0.987
AWU55_2124
Type I restriction enzyme M protein; Scaffold_25_45.
 
 
 0.976
AWU55_1759
Hypothetical protein; Scaffold_12_30.
 
     0.950
AWU55_2125
Type I restriction-modification system, specificity subunit S; Scaffold_25_46.
 
  
 0.867
AWU55_2085
Putative transcriptional regulator; Scaffold_25_6.
 
    0.706
AWU55_2989
Transcriptional regulator; Scaffold_176_1.
  
    0.625
AWU55_1761
Hypothetical protein; Scaffold_12_32.
       0.565
AWU55_891
OmpA-like transmembrane region; Scaffold_3_100.
   
    0.523
AWU55_1762
Appr-1-p processing domain-containing protein; Scaffold_12_33.
 
     0.482
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.