STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_1944GCN5-like N-acetyltransferase; Scaffold_19_24. (162 aa)    
Predicted Functional Partners:
argA
Amino-acid N-acetyltransferase; Scaffold_4_71; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.770
AWU55_2863
Urea carboxylase; Scaffold_85_8.
   
  0.691
AWU55_205
Putative protease; Scaffold_0_205.
  
 0.647
AWU55_1144
XRE family transcriptional regulator; Scaffold_5_65.
   
 
 0.606
AWU55_1945
Hypothetical protein; Scaffold_19_25.
       0.551
AWU55_1943
LysR family transcriptional regulator; Scaffold_19_23; Belongs to the LysR transcriptional regulatory family.
       0.532
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.505
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.484
AWU55_1277
UPF0079 ATP-binding protein; Scaffold_6_69.
  
 
 0.480
cysS
cysteinyl-tRNA synthetase; Scaffold_3_109; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.478
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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