STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_2010Helicase domain-containing protein; Scaffold_19_90. (1344 aa)    
Predicted Functional Partners:
AWU55_1297
Cysteine desulfurase / selenocysteine lyase; Scaffold_6_89; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.999
AWU55_1323
Cysteine desulfurase; Scaffold_7_24.
  
 0.999
AWU55_2248
DnaJ like chaperone protein; Scaffold_29_18.
  
 
 0.996
AWU55_2008
Phospholipase D/Transphosphatidylase; Scaffold_19_88.
 
 
   0.994
AWU55_2009
Hypothetical protein; Scaffold_19_89.
 
 
   0.994
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.985
nfuA
Thioredoxin; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.976
AWU55_1295
Fe-S cluster assembly ATP-binding protein; Scaffold_6_87.
  
 
 0.961
AWU55_2012
Hypothetical protein; Scaffold_19_92.
 
     0.950
AWU55_2013
Helicase domain-containing protein; Scaffold_19_93.
 
   
 0.950
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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