STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_20245-dehydro-4-deoxyglucarate dehydratase; Scaffold_22_9; Belongs to the DapA family. (305 aa)    
Predicted Functional Partners:
AWU55_2020
Mandelate racemase/muconate lactonizing enzyme; Scaffold_22_5; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.970
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.929
AWU55_2781
Altronate hydrolase; Scaffold_66_45.
    
 0.874
AWU55_2019
Scaffold_22_4.
 
  
 0.864
AWU55_2016
NADP-dependent aldehyde dehydrogenase; Scaffold_22_1.
 
 
  0.863
AWU55_542
Chorismate mutase / prephenate dehydratase; Scaffold_1_173.
  
  
 0.851
AWU55_2018
NAD-dependent epimerase/dehydratase; Scaffold_22_3.
 
   
 0.848
AWU55_3140
NADP-dependent aldehyde dehydrogenase; Scaffold_1575_1.
 
 
  0.840
AWU55_3137
NADP-dependent aldehyde dehydrogenase; Scaffold_989_3.
 
 
  0.824
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.802
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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