STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_2517Hypothetical protein; Scaffold_39_54. (172 aa)    
Predicted Functional Partners:
AWU55_61
DNA polymerase III subunit alpha; Scaffold_0_61.
   
 0.887
AWU55_2610
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.845
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.732
AWU55_587
Von Willebrand factor, type A; Scaffold_1_218.
  
     0.685
rpmD
Large subunit ribosomal protein L30; Scaffold_0_336.
   
  0.649
AWU55_1222
Regulator of sigma D; Scaffold_6_14; Belongs to the Rsd/AlgQ family.
  
     0.631
AWU55_2518
Hypothetical protein; Scaffold_39_55.
 
     0.630
AWU55_1103
Hypothetical protein; Scaffold_5_24.
  
     0.595
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.591
AWU55_3123
DNA polymerase III subunit gamma/tau; Scaffold_455_8.
   
 0.591
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.