STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_2607Oxidoreductase alpha (molybdopterin) subunit; Scaffold_43_34; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (790 aa)    
Predicted Functional Partners:
AWU55_1981
Formate dehydrogenase, beta subunit; Scaffold_19_61.
  
 0.998
AWU55_180
Cytochrome c oxidase cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.996
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.974
AWU55_1067
Glutamate synthase (NADPH/NADH) large chain; Scaffold_4_119.
  
 0.973
AWU55_2951
Nitrate reductase 1, beta subunit; Scaffold_120_5.
   
 0.956
AWU55_1490
FdhD protein; Scaffold_9_11.
 
 
 0.955
AWU55_1977
Iron-sulfur binding 4Fe-4S ferredoxin; Scaffold_19_57.
  
 
 0.950
AWU55_1982
Formate dehydrogenase, gamma subunit; Scaffold_19_62.
  
 0.948
nuoC
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.922
AWU55_2295
Pyruvate carboxylase subunit B; Scaffold_30_7.
     
 0.921
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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