STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_2664Putative tricarboxylic transport membrane protein; Scaffold_47_5. (504 aa)    
Predicted Functional Partners:
AWU55_2666
Putative tricarboxylic transport membrane protein; Scaffold_47_7.
 
 
  0.977
AWU55_2665
Putative tricarboxylic transport membrane protein; Scaffold_47_6.
 
 
 0.966
AWU55_983
Hypothetical protein; Scaffold_4_35.
 
  0.941
AWU55_2623
Hypothetical protein; Scaffold_46_8.
 
 
  0.940
AWU55_1901
Putative tricarboxylic transport membrane protein; Scaffold_18_37.
 
 
  0.894
AWU55_1900
Tripartite Tricarboxylate transporter (TTT) family, small transmembrane protein; Scaffold_18_36.
 
 
 0.781
AWU55_1548
Hypothetical protein; Scaffold_9_69.
   
 
  0.529
AWU55_2670
Extracellular solute-binding protein; Scaffold_47_11.
       0.524
AWU55_2667
IclR family transcriptional regulator; Scaffold_47_8.
       0.523
AWU55_2668
Two-component system, OmpR family, response regulator TctD; Scaffold_47_9.
       0.523
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.