STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_2875ABC transporter-like protein; Scaffold_85_20. (235 aa)    
Predicted Functional Partners:
AWU55_2873
Branched-chain amino acid transport system permease protein; Scaffold_85_18; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AWU55_2874
Inner-membrane translocator; Scaffold_85_19; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
AWU55_2876
ABC transporter-like protein; Scaffold_85_21.
 
 
0.996
AWU55_2872
Branched-chain amino acid transport system substrate-binding protein; Scaffold_85_17.
 
 
 0.985
AWU55_805
Branched-chain amino acid transport system permease protein; Scaffold_3_14; Belongs to the binding-protein-dependent transport system permease family.
 
 0.964
AWU55_804
Branched-chain amino acid transport system permease protein; Scaffold_3_13; Belongs to the binding-protein-dependent transport system permease family.
 
 0.946
AWU55_803
Branched-chain amino acid transport system substrate-binding protein; Scaffold_3_12.
  
 
 0.867
AWU55_806
Urea ABC transporter ATP-binding protein; Scaffold_3_15.
 
 
0.806
AWU55_1482
ABC-type multidrug transport system, ATPase component; Scaffold_9_3.
 
   
 
0.693
AWU55_2175
Antibiotic transport system ATP-binding protein; Scaffold_27_50.
 
   
 
0.535
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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