STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_3059Bacterioferritin-associated ferredoxin; Scaffold_251_6. (67 aa)    
Predicted Functional Partners:
AWU55_3060
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.985
AWU55_1067
Glutamate synthase (NADPH/NADH) large chain; Scaffold_4_119.
    
 0.909
AWU55_1676
rubredoxin-NAD+ reductase; Scaffold_11_50; Belongs to the FAD-dependent oxidoreductase family.
 
 
 0.773
AWU55_2533
Putative Rieske iron-sulfur protein; Scaffold_42_10.
  
 
 0.704
AWU55_1323
Cysteine desulfurase; Scaffold_7_24.
  
 
  0.643
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
     0.633
AWU55_17
Sarcosine oxidase, subunit alpha; Scaffold_0_17; Belongs to the GcvT family.
    
  0.620
nfuA
Thioredoxin; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
 
  
 0.615
AWU55_2949
MFS transporter, NNP family, nitrate/nitrite transporter; Scaffold_120_3.
  
 
 0.605
AWU55_889
Glycerophosphoryl diester phosphodiesterase; Scaffold_3_98.
    
  0.601
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.