STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_3103Hypothetical protein; Scaffold_407_3. (845 aa)    
Predicted Functional Partners:
AWU55_3104
ABC transporter-like protein; Scaffold_407_4.
 
  
  0.970
AWU55_3105
acyl-CoA thioesterase I; Scaffold_407_5.
 
     0.922
AWU55_2286
Hypothetical protein; Scaffold_29_56.
  
    0.728
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.608
AWU55_2288
Hypothetical protein; Scaffold_29_58.
  
 
 0.608
AWU55_1107
Lipoprotein-releasing system permease protein; Scaffold_5_28.
    
  0.424
AWU55_2287
Putative ABC transport system permease protein; Scaffold_29_57.
    
  0.424
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.