STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_717Acyltransferase 3; Scaffold_2_129. (420 aa)    
Predicted Functional Partners:
AWU55_2859
Hypothetical protein; Scaffold_85_4.
  
     0.704
AWU55_2830
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase; Scaffold_74_4.
 
   
 0.635
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
    
  0.585
AWU55_2675
Hypothetical protein; Scaffold_47_16.
  
     0.581
AWU55_716
Periplasmic glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
     
 0.580
fur-2
Fur family transcriptional regulator, zinc uptake regulator; Scaffold_2_130; Belongs to the Fur family.
     
 0.534
AWU55_195
Multi-sensor hybrid histidine kinase; Scaffold_0_195.
 
  
 0.515
AWU55_199
SprT protein; Scaffold_0_199; Belongs to the SprT family.
  
     0.513
AWU55_1692
Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
  
     0.508
AWU55_137
TetR family transcriptional regulator; Scaffold_0_137.
  
     0.488
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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