STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU55_893Hypothetical protein; Scaffold_3_102. (150 aa)    
Predicted Functional Partners:
AWU55_894
tRNA-(ms[2]io[6]A)-hydroxylase; Scaffold_3_103.
     0.944
AWU55_895
Adenylate/guanylate cyclase; Scaffold_3_104.
 
     0.726
AWU55_896
Adenylate/guanylate cyclase; Scaffold_3_105.
 
     0.725
AWU55_955
Lipoprotein-34; Scaffold_4_7.
  
     0.642
AWU55_1613
Hypothetical protein; Scaffold_9_134.
  
     0.575
AWU55_3028
O-antigen polymerase; Scaffold_208_8.
  
     0.563
AWU55_1936
Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
     0.543
AWU55_892
Aconitate hydratase 2 / 2-methylisocitrate dehydratase; Scaffold_3_101; Belongs to the aconitase/IPM isomerase family.
       0.508
AWU55_1291
Alginate biosynthesis protein Alg8; Scaffold_6_83.
  
     0.485
AWU55_2179
Hypothetical protein; Scaffold_27_54.
  
     0.483
Your Current Organism:
Halomonadaceae bacterium T822
NCBI taxonomy Id: 1783518
Other names: H. bacterium T82-2, Halomonadaceae bacterium T82-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.