STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG98041.1Alkaline phosphatase D. (443 aa)    
Predicted Functional Partners:
SDG97987.1
Hypothetical protein.
       0.762
SDH26339.1
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.726
SDH46736.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
  
 0.669
SDG97953.1
2-oxoglutarate dehydrogenase E1 component.
       0.530
folE
GTP cyclohydrolase I.
    
 0.476
folE-2
GTP cyclohydrolase I.
    
 0.476
SDH21351.1
Alkaline phosphatase D.
  
  
 
0.433
SDG93274.1
Hypothetical protein.
  
    0.402
Your Current Organism:
Flavobacterium omnivorum
NCBI taxonomy Id: 178355
Other names: AS 1.2747, F. omnivorum, Flavobacterium omnivorum Zhu et al. 2003, JCM 11313, strain ZF-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.