STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20641.1Nitroreductase. (210 aa)    
Predicted Functional Partners:
SDH20610.1
DNA-binding transcriptional regulator, MarR family.
  
 
  0.813
SDH20661.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.667
SDH20297.1
O-succinylbenzoic acid--CoA ligase.
   
   0.576
SDH94364.1
Nitroreductase.
  
  
 
0.488
SDH53893.1
Luciferase family oxidoreductase, group 1.
   
 
 0.475
SDH23007.1
NAD(P)H-dependent FMN reductase.
     
 0.445
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 
 0.443
SDG99667.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.442
SDH40000.1
4a-hydroxytetrahydrobiopterin dehydratase.
   
 
  0.440
SDI10631.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.435
Your Current Organism:
Flavobacterium omnivorum
NCBI taxonomy Id: 178355
Other names: AS 1.2747, F. omnivorum, Flavobacterium omnivorum Zhu et al. 2003, JCM 11313, strain ZF-8
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