STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH47792.11-acyl-sn-glycerol-3-phosphate acyltransferase. (244 aa)    
Predicted Functional Partners:
SDH47286.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
  
  0.933
SDG59645.1
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.911
SDI19706.1
Phosphatidate cytidylyltransferase.
  
 
  0.897
SDH08055.1
Diacylglycerol kinase (ATP).
     
 0.890
SDH47832.1
Acyl-[acyl-carrier-protein] desaturase.
 
     0.880
SDH39528.1
Glycerol-3-phosphate dehydrogenase.
    
 0.870
SDH39925.1
Lipid kinase, YegS/Rv2252/BmrU family.
    
  0.745
SDH47882.1
Uncharacterized protein.
       0.646
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.535
SDG91958.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
  
  0.504
Your Current Organism:
Flavobacterium omnivorum
NCBI taxonomy Id: 178355
Other names: AS 1.2747, F. omnivorum, Flavobacterium omnivorum Zhu et al. 2003, JCM 11313, strain ZF-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.