STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH74995.1Gliding motility-associated C-terminal domain-containing protein. (774 aa)    
Predicted Functional Partners:
SDH74943.1
ABC-2 family transporter protein.
 
     0.776
SDG96519.1
Hypothetical protein.
  
     0.713
SDH75022.1
Gliding motility-associated C-terminal domain-containing protein.
 
    
0.712
SDH75053.1
Gliding motility-associated C-terminal domain-containing protein.
 
    
0.696
SDG66591.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.656
SDG99796.1
Hypothetical protein.
  
     0.655
SDG99821.1
PA14 domain-containing protein.
  
     0.645
SDH57895.1
Hypothetical protein.
  
     0.631
SDG91785.1
CarboxypepD_reg-like domain-containing protein.
  
 
   0.621
SDH97304.1
Protein of unknown function.
  
     0.614
Your Current Organism:
Flavobacterium omnivorum
NCBI taxonomy Id: 178355
Other names: AS 1.2747, F. omnivorum, Flavobacterium omnivorum Zhu et al. 2003, JCM 11313, strain ZF-8
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