node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG69013.1 | dinB-3 | SAMN04488062_101394 | SAMN04488062_12016 | Protein of unknown function. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.636 |
SDG98360.1 | SDH54196.1 | SAMN04488062_103278 | SAMN04488062_10965 | DNA polymerase V; Belongs to the peptidase S24 family. | DNA polymerase-3 subunit alpha. | 0.519 |
SDG98360.1 | SDI01173.1 | SAMN04488062_103278 | SAMN04488062_12015 | DNA polymerase V; Belongs to the peptidase S24 family. | Error-prone DNA polymerase. | 0.519 |
SDG98360.1 | dinB-3 | SAMN04488062_103278 | SAMN04488062_12016 | DNA polymerase V; Belongs to the peptidase S24 family. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.792 |
SDG98360.1 | recA | SAMN04488062_103278 | SAMN04488062_10851 | DNA polymerase V; Belongs to the peptidase S24 family. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.978 |
SDH48528.1 | SDH84449.1 | SAMN04488062_10882 | SAMN04488062_11616 | Hypothetical protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
SDH48528.1 | dinB-3 | SAMN04488062_10882 | SAMN04488062_12016 | Hypothetical protein. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.871 |
SDH48528.1 | polA | SAMN04488062_10882 | SAMN04488062_101246 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.997 |
SDH48528.1 | recA | SAMN04488062_10882 | SAMN04488062_10851 | Hypothetical protein. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.823 |
SDH54117.1 | SDH54196.1 | SAMN04488062_10963 | SAMN04488062_10965 | Helix-turn-helix domain-containing protein. | DNA polymerase-3 subunit alpha. | 0.812 |
SDH54117.1 | SDI01173.1 | SAMN04488062_10963 | SAMN04488062_12015 | Helix-turn-helix domain-containing protein. | Error-prone DNA polymerase. | 0.740 |
SDH54117.1 | dinB-3 | SAMN04488062_10963 | SAMN04488062_12016 | Helix-turn-helix domain-containing protein. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.609 |
SDH54117.1 | recA | SAMN04488062_10963 | SAMN04488062_10851 | Helix-turn-helix domain-containing protein. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.409 |
SDH54196.1 | SDG98360.1 | SAMN04488062_10965 | SAMN04488062_103278 | DNA polymerase-3 subunit alpha. | DNA polymerase V; Belongs to the peptidase S24 family. | 0.519 |
SDH54196.1 | SDH54117.1 | SAMN04488062_10965 | SAMN04488062_10963 | DNA polymerase-3 subunit alpha. | Helix-turn-helix domain-containing protein. | 0.812 |
SDH54196.1 | SDH84449.1 | SAMN04488062_10965 | SAMN04488062_11616 | DNA polymerase-3 subunit alpha. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.928 |
SDH54196.1 | SDI01252.1 | SAMN04488062_10965 | SAMN04488062_12017 | DNA polymerase-3 subunit alpha. | Transcriptional regulator, contains XRE-family HTH domain. | 0.730 |
SDH54196.1 | dinB-3 | SAMN04488062_10965 | SAMN04488062_12016 | DNA polymerase-3 subunit alpha. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.796 |
SDH54196.1 | polA | SAMN04488062_10965 | SAMN04488062_101246 | DNA polymerase-3 subunit alpha. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.471 |
SDH84449.1 | SDH48528.1 | SAMN04488062_11616 | SAMN04488062_10882 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.999 |