STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI13131.1Hypothetical protein. (383 aa)    
Predicted Functional Partners:
SDI13031.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.914
SDI13079.1
Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.799
SDH93112.1
Hypothetical protein.
  
     0.607
SDH93014.1
Hypothetical protein.
  
     0.602
SDH92977.1
Protein of unknown function.
  
     0.513
SDH69020.1
Protein of unknown function.
  
     0.470
Your Current Organism:
Flavobacterium omnivorum
NCBI taxonomy Id: 178355
Other names: AS 1.2747, F. omnivorum, Flavobacterium omnivorum Zhu et al. 2003, JCM 11313, strain ZF-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.