STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM61560.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (232 aa)    
Predicted Functional Partners:
SHN06638.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
  
  
  0.782
SHM48571.1
Glutamate synthase (NADH) large subunit.
    
 0.763
SHM29655.1
PAS domain S-box-containing protein.
   
 0.707
SHM38373.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
 0.707
SHN00345.1
Signal transduction histidine kinase.
  
 0.669
SHM00297.1
PAS fold-containing protein.
  
 0.612
SHM61530.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.587
SHN06960.1
Glycine dehydrogenase; Belongs to the GcvP family.
  
  
  0.587
SHM60165.1
Adenylate cyclase, class 3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 0.566
SHM57869.1
Signal transduction histidine kinase.
   
 0.558
Your Current Organism:
Flavobacterium xinjiangense
NCBI taxonomy Id: 178356
Other names: AS 1.2749, F. xinjiangense, Flavobacterium xinjiangense Zhu et al. 2003, JCM 11314, strain ZF-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.