STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN19499.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
SHN19484.1
Bacteroides conjugative transposon TraN protein.
 
     0.926
SHN19514.1
Hypothetical protein.
 
     0.916
SHN19470.1
Bacteroides conjugative transposon TraM protein.
 
     0.901
SHN13981.1
Bacteroides conjugative transposon TraM protein.
 
     0.781
SHN13931.1
Hypothetical protein.
 
     0.778
SHN13939.1
Bacteroides conjugative transposon TraJ protein.
 
     0.778
SHN13949.1
Hypothetical protein.
 
     0.778
SHN13957.1
Bacteroides conjugative transposon TraJ protein.
 
     0.778
SHN13915.1
Hypothetical protein.
 
     0.776
SHN13924.1
Hypothetical protein.
 
     0.776
Your Current Organism:
Flavobacterium xinjiangense
NCBI taxonomy Id: 178356
Other names: AS 1.2749, F. xinjiangense, Flavobacterium xinjiangense Zhu et al. 2003, JCM 11314, strain ZF-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.