Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP21486.1 | AMP21487.1 | VC42_00060 | VC42_00065 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein YcaR in KDO2-Lipid A biosynthesis cluster; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family. | 0.897 |
| AMP21486.1 | AMP21928.1 | VC42_00060 | VC42_03040 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.836 |
| AMP21486.1 | AMP22286.1 | VC42_00060 | VC42_05480 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| AMP21486.1 | AMP22319.1 | VC42_00060 | VC42_05695 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.923 |
| AMP21486.1 | AMP23063.1 | VC42_00060 | VC42_10355 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.894 |
| AMP21486.1 | AMP23633.1 | VC42_00060 | VC42_13875 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.857 |
| AMP21486.1 | AMP23871.1 | VC42_00060 | VC42_15475 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| AMP21486.1 | AMP24998.1 | VC42_00060 | VC42_22695 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| AMP21486.1 | AMP25505.1 | VC42_00060 | VC42_25920 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| AMP21486.1 | AMP25937.1 | VC42_00060 | VC42_06340 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AMP21487.1 | AMP21486.1 | VC42_00065 | VC42_00060 | Protein YcaR in KDO2-Lipid A biosynthesis cluster; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family. | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.897 |
| AMP21928.1 | AMP21486.1 | VC42_03040 | VC42_00060 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.836 |
| AMP21928.1 | AMP22286.1 | VC42_03040 | VC42_05480 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP22319.1 | VC42_03040 | VC42_05695 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP23063.1 | VC42_03040 | VC42_10355 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| AMP21928.1 | AMP23633.1 | VC42_03040 | VC42_13875 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP23871.1 | VC42_03040 | VC42_15475 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP24998.1 | VC42_03040 | VC42_22695 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP25505.1 | VC42_03040 | VC42_25920 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP21928.1 | AMP25937.1 | VC42_03040 | VC42_06340 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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