Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AMP21559.1FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
AMP25351.1
Deazaflavin-dependent nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.707
AMP25758.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
AMP23814.1
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
AMP25923.1
Deazaflavin-dependent nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.673
AMP22097.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
AMP22439.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.640
AMP23363.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.626
AMP23794.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
AMP22967.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
AMP23535.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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