STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMP21647.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (639 aa)    
Predicted Functional Partners:
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
   0.669
AMP24228.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
  
 
 0.548
AMP21649.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.504
AMP21650.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
AMP21652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
AMP24379.1
Carotenoid oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.445
AMP21525.1
CbbX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.435
AMP23685.1
Secretion protein EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.435
AMP24099.1
Secretion protein EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.435
AMP24629.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.435
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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