STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP21780.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
AMP21781.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.946
AMP22247.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.868
AMP25805.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.823
AMP25804.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.717
AMP22906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.622
AMP22251.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.464
AMP25806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
AMP24046.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.451
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.