Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP22025.1Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
AMP22026.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMP22024.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
AMP22268.1
Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
    
  0.901
AMP25961.1
Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
    
  0.901
AMP25071.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
    
  0.901
AMP22023.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
AMP21607.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.738
AMP23304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.509
AMP22806.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AMP24167.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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