STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP22109.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
AMP22110.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.960
AMP24093.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.901
AMP25962.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.900
AMP22159.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.898
AMP22111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.872
AMP21524.1
Ribulose 1,5-bisphosphate carboxylase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
rbcL
Ribulose 1,5-bisphosphate carboxylase; Type III RuBisCO; involved in carbon fixation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RuBisCO large chain family.
    
 0.852
AMP21502.1
ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.835
AMP22108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.835
atpH
ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.
  
 
  0.813
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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