STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP22373.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)    
Predicted Functional Partners:
AMP23921.1
Maltokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
AMP26206.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.943
AMP22372.1
Group 2 truncated hemoglobin GlbO; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.934
AMP26191.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.933
AMP21696.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.924
AMP22954.1
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.918
AMP22231.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.884
AMP25973.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.884
AMP24320.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.884
AMP24645.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.884
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.