Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP22674.1Abortive infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
AMP22675.1
NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
AMP22586.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.621
AMP25980.1
Stilbene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
AMP21489.1
Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.526
AMP25455.1
Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
AMP21731.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
       0.511
AMP25531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.498
AMP23024.1
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.496
AMP22676.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
AMP22458.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.473
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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