STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP23066.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
AMP22631.1
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
AMP21993.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
AMP22409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
AMP24952.1
Low molecular weight protein antigen 6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
AMP25237.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
AMP25259.1
Secreted alanine rich protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
AMP22369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
AMP23418.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
AMP23065.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.650
AMP22738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.