Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP23073.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
AMP23856.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
AMP23110.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
AMP23905.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.760
AMP23144.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
AMP23071.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
AMP23072.1
Fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
AMP23136.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
AMP23098.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
AMP25944.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
AMP23907.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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