Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP23109.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
AMP23108.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
AMP26052.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.957
AMP23110.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.941
AMP22454.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
AMP22453.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
AMP25119.1
uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.580
AMP22853.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.567
AMP24297.1
uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.553
AMP25612.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.548
AMP25676.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.548
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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