STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMP23340.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
AMP23341.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
AMP23342.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
AMP23339.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.952
AMP23343.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
AMP23356.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.826
AMP22866.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.812
AMP26085.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.795
AMP23357.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.781
AMP22643.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.775
AMP26084.1
acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.773
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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