STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP26125.1Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
AMP23522.1
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
AMP24692.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.734
AMP23521.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
AMP24325.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
AMP22738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
AMP24682.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
AMP26313.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
AMP22903.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.414
AMP25758.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.413
AMP26187.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.413
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.